Biomedical Informatics Faculty

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Christopher Benner

Christopher Benner

Assistant Professor in Residence, School of Medicine

BISB Research Area(s):
  • Epigenomics and Gene Expression Control
BMI Research Area(s):
  • Bioinformatics Applications in Human Disease
Lukas Chavez

Lukas Chavez

Assistant Professor, School of Medicine

BISB Research Area(s):
  • Epigenomics and Gene Expression Control
  • Genetic and Molecular Networks
BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Bioinformatics Applications in Human Disease

Research Focus: Chromatin and Gene Regulation in Childhood Cancers

Robert El-Kareh

Robert El-Kareh

Associate Professor, Biomedical Informatics

BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Decision Support Systems

Research Focus: Clinical informatics, clinical decision support, diagnostic safety, quality improvement, patient safety

Charles Elkan

Charles Elkan

Professor, Computer Science and Engineering

BISB Research Area(s):
  • Quantitative Foundations of Computational Biology
  • Genetic and Molecular Networks
BMI Research Area(s):
  • Privacy Technology, Data Sharing, and Big Data Analytics
  • Biomedical Natural Language Processing

Research Focus: Artificial Intelligence

Emma Farley

Emma Farley

Assistant Professor, Biological Sciences

BISB Research Area(s):
  • Epigenomics and Gene Expression Control
  • Dynamical Systems, Stochastic Processes, and Biological Circuits
BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Bioinformatics Applications in Human Disease

Research Focus: High-throughput functional assays in developing embryos to decipher how genomes instruct development

Rodney Gabriel

Rodney Gabriel

Assistant Clinical Professor, School of Medicine

BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine

Research Focus: Perioperative outcomes, pharmacogenomics, machine learning, predictive modeling, regional anesthesia, acute pain.

Christopher Glass

Christopher Glass

Professor, Cellular and Molecular Medicine

BISB Research Area(s):
  • Epigenomics and Gene Expression Control
  • Genetic and Molecular Networks
BMI Research Area(s):
  • Bioinformatics Applications in Human Disease

Research Focus: Enhancer Selection and Functions, Macrophage Subtypes, Genetic Variation, Enhancer Transcription

Olivier Harismendy

Olivier Harismendy

Assistant Professor, Biomedical Informatics

BISB Research Area(s):
  • Epigenomics and Gene Expression Control
  • Genetic and Molecular Networks
BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Bioinformatics Applications in Human Disease

Research Focus: My laboratory develops genome-wide assays and analysis for personalized cancer care. Particular focus includes genetics of cancer susceptibility and drug response, secure computing and data sharing.

Michael Hogarth

Michael Hogarth

Assoc Physician Dipl, School of Medicine

BMI Research Area(s):
  • Data Models and Knowledge Representation
  • Biomedical Natural Language Processing

Research Focus: Development of next generation public health information systems, terminology/ontology infrastructure in biomedical informatics, and developing systems that support clinical research at the point of care.

Albert Hsiao

Albert Hsiao

Assistant Professor in Residence, Radiology

BMI Research Area(s):
  • Bioinformatics Applications in Human Disease

Research Focus: Cardiac and vascular imaging

Chun-Nan Hsu

Chun-Nan Hsu

Associate Professor of Medicine, Biomedical Informatics

BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Data Models and Knowledge Representation
  • Biomedical Natural Language Processing

Research Focus: Information extraction from biomedical literature and clinical notes by machine learning

Lilia Iakoucheva

Lilia Iakoucheva

Associate Professor, Psychiatry

BISB Research Area(s):
  • Genetic and Molecular Networks
BMI Research Area(s):
  • Bioinformatics Applications in Human Disease

Research Focus: Autism, genetics, gene expression, protein interactions, systems biology, networks, psychiatric diseases, whole genome sequencing

Jejo Koola

Jejo Koola

Assistant Clinical Professor, School of Medicine

BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Biomedical Natural Language Processing

Research Focus: Practicing internist in the field of hospital medicine and clinical informatics. Research focus is on using informatics tools (including predictive analytics, natural language processing, and information visualization) to improve the care of multi-morbid hospital patients.

Tsung-Ting Kuo

Tsung-Ting Kuo

Assistant Professor, Biomedical Informatics

BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Privacy Technology, Data Sharing, and Big Data Analytics
  • Biomedical Natural Language Processing

Research Focus: Blockchain Technologies, Machine Learning, Natural Language Processing

Fima Macheret

Fima Macheret

Physician, School of Medicine

BMI Research Area(s):
  • Bioinformatics Applications in Human Disease
Lucila Ohno-Machado

Lucila Ohno-Machado

Professor, Biomedical Informatics

BISB Research Area(s):
  • Epigenomics and Gene Expression Control
BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Privacy Technology, Data Sharing, and Big Data Analytics

Research Focus: Biomedical Informatics, predictive modeling, biomedical data analytics

Dorothy Sears

Dorothy Sears

Associate Professor, School of Medicine

BISB Research Area(s):
  • Proteomics and Metabolomics
  • Epigenomics and Gene Expression Control
BMI Research Area(s):
  • Bioinformatics Applications in Human Disease

Research Focus: Mechanisms and biomarkers of nsulin resistance, type 2 diabetes, obesity, breast cancer, PPARgamma, inflammation

Gene Yeo

Gene Yeo

Professor, Cellular and Molecular Medicine
Graduate Program Associate Director, Bioinformatics and Systems Biology

BISB Research Area(s):
  • Quantitative Foundations of Computational Biology
  • Comparative and Population Genomics
  • Proteomics and Metabolomics
  • Epigenomics and Gene Expression Control
  • Genetic and Molecular Networks
  • Dynamical Systems, Stochastic Processes, and Biological Circuits
BMI Research Area(s):
  • Predictive Modeling and Personalized Medicine
  • Privacy Technology, Data Sharing, and Big Data Analytics
  • Bioinformatics Applications in Human Disease

Research Focus: We develop computational, molecular, biochemical and cellular approaches to understanding and treating human diseases such as neurodegeneration and autism.